Basic Information
Locus ID:
gene-LOC132624820
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 68254735 | 68259611 | + | gene-LOC132624820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 36,933.42 Da | 29.30 | 91.25 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 47 | 89 | 7.3E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 89 | 184 | 1.18E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 103 | 1.83E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 47 | 86 | 1.7E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 203 | 1.2E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 47 | 87 | 8.517177 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_016559139.2 | F-box protein SKIP14 [Capsicum annuum] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8FTU2 | F-box protein SKIP14-like isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107858854 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology