Basic Information
Locus ID:
gene-LOC132624595
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 3867497 | 3868469 | - | gene-LOC132624595 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 33,692.30 Da | 42.19 | 94.40 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 60 | 281 | 2.0E-76 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 89 | 279 | 1.24E-36 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 88 | 296 | 2.6E-70 | IPR027417 |
| SMART | SM00382 | AAA_5 | 110 | 271 | 2.3E-4 | IPR003593 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 253 | 279 | 9.126745 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 88 | 247 | 26.067633 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 146 | 175 | 1.4E-41 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 218 | 247 | 1.4E-41 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 267 | 295 | 1.4E-41 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 180 | 209 | 1.4E-41 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_027768299.1 | DNA repair protein recA homolog 2, mitochondrial [Solanum pennellii] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | B1N670 | Putative recA protein OS=Solanum lycopersicum OX=4081 GN=101263651 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology