Basic Information
Locus ID:
gene-LOC132624382
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 67810031 | 67813666 | + | gene-LOC132624382 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 77,745.83 Da | 41.81 | 90.67 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 319 | 523 | 1.4E-47 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 40 | 126 | 3.7E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 147 | 234 | 3.1E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 301 | 634 | 9.98E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 128 | 5.8E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 623 | 1.3E-52 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 137 | 235 | 6.8E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 278 | 394 | 8.6E-33 | - |
| SMART | SM00220 | serkin_6 | 319 | 582 | 4.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 631 | 38.859325 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 128 | 15.97288 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 133 | 236 | 12.750333 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 347 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 440 | 452 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28670.1 | Protein kinase family protein with domain of unknown function (DUF26). | 0 |
| RefSeq | XP_006357154.1 | PREDICTED: putative cysteine-rich receptor-like protein kinase 43 isoform X1 [Solanum tuberosum] | 0 |
| Q9M0G5 | Cysteine-rich receptor-like protein kinase 46 OS=Arabidopsis thaliana OX=3702 GN=CRK46 PE=3 SV=1 | 0 | |
| TrEMBL | M1A9H0 | Protein kinase family protein OS=Solanum tuberosum OX=4113 GN=102590453 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology