halophFGD

Basic Information

Locus ID: gene-LOC132624192

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Reverse transcriptase (RNA-dependent DNA polymerase)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr12	35099091	35102724	-	gene-LOC132624192

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.55	19,924.59 Da	24.08	86.72	-0.49

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	4	60	8.3E-8	IPR000477

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_009769881.1	PREDICTED: uncharacterized protein LOC104220677 [Nicotiana sylvestris]	0
TrEMBL	A0A1U7VY43	uncharacterized protein LOC104220677 OS=Nicotiana sylvestris OX=4096 GN=LOC104220677 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg22385, Sbi_jg25863
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00007598, GOSA_00020792
Amaranthaceae	Suaeda glauca	1	Sgl20234
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007376, gene:ENSEOMG00000009922 ... gene:ENSEOMG00000014439, gene:ENSEOMG00000021206, gene:ENSEOMG00000032143, gene:ENSEOMG00000044692
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.4AG0021820, CQ.Regalona.r1.6AG0000030 ... CQ.Regalona.r1.6AG0001550
Asteraceae	Flaveria trinervia	16	Ftri11G29042, Ftri15G13285, Ftri15G27723, Ftri16G20483 ... Ftri17G20434, Ftri18G10643, Ftri18G13665, Ftri3G02489, Ftri4G14462, Ftri5G10762, Ftri6G09660, Ftri7G32935, Ftri7G33047, Ftri8G20906, Ftri9G08243, Ftri9G31977
Poaceae	Echinochloa crus-galli	51	AH01.164, AH01.394, AH02.1450, AH02.1545, AH02.2093, AH05.25 ... AH02.4536, AH03.1525, AH03.2542, AH03.3965, AH04.1546, AH04.857, AH05.694, AH07.2325, AH07.2725, AH08.227, BH01.3744, BH01.442, BH01.4776, BH01.4855, BH02.3376, BH03.266, BH05.2619, BH06.1851, BH06.1999, BH06.2556, BH06.2850, BH07.2229, BH07.2676, BH07.4192, BH08.1004, BH09.493, CH01.2044, CH01.2149, CH01.2234, CH01.3240, CH01.3413, CH02.3232, CH03.2630, CH03.3774, CH04.126, CH04.165, CH04.1903, CH05.3093, CH05.4464, CH07.2011, CH07.2447, CH09.1936, CH09.2670, CH09.2864, CH09.627
Poaceae	Eleusine coracana subsp. coracana	1	gene-QOZ80_4BG0332600
Poaceae	Hordeum vulgare	36	HORVU.MOREX.r3.1HG0031420.1.CDS1 ... HORVU.MOREX.r3.1HG0083430.1.CDS1, HORVU.MOREX.r3.2HG0119660.1.CDS1, HORVU.MOREX.r3.2HG0157690.1.CDS1, HORVU.MOREX.r3.2HG0172390.1, HORVU.MOREX.r3.2HG0197280.1.CDS1, HORVU.MOREX.r3.3HG0277230.1.CDS1, HORVU.MOREX.r3.3HG0287370.1.CDS1, HORVU.MOREX.r3.4HG0361670.1.CDS1, HORVU.MOREX.r3.4HG0362580.1.CDS1, HORVU.MOREX.r3.4HG0389020.1.CDS1, HORVU.MOREX.r3.4HG0413260.1.CDS1, HORVU.MOREX.r3.5HG0429430.1.CDS1, HORVU.MOREX.r3.5HG0432680.1.CDS1, HORVU.MOREX.r3.5HG0455710.1.CDS1, HORVU.MOREX.r3.5HG0458740.1, HORVU.MOREX.r3.5HG0468170.1, HORVU.MOREX.r3.5HG0470180.1.CDS1, HORVU.MOREX.r3.5HG0470490.1.CDS1, HORVU.MOREX.r3.5HG0484160.1.CDS1, HORVU.MOREX.r3.6HG0539110.1.CDS1, HORVU.MOREX.r3.6HG0555430.1, HORVU.MOREX.r3.6HG0558830.1.CDS1, HORVU.MOREX.r3.6HG0585190.1.CDS1, HORVU.MOREX.r3.6HG0605780.1.CDS1, HORVU.MOREX.r3.6HG0608230.1.CDS1, HORVU.MOREX.r3.6HG0608930.1.CDS1, HORVU.MOREX.r3.6HG0609870.1.CDS1, HORVU.MOREX.r3.6HG0614030.1, HORVU.MOREX.r3.7HG0665290.1.CDS1, HORVU.MOREX.r3.7HG0675970.1.CDS1, HORVU.MOREX.r3.7HG0686270.1.CDS1, HORVU.MOREX.r3.7HG0690540.1.CDS1, HORVU.MOREX.r3.7HG0694470.1.CDS1, HORVU.MOREX.r3.7HG0706070.1.CDS1, HORVU.MOREX.r3.7HG0712050.1.CDS1
Poaceae	Lolium multiflorum	14	gene-QYE76_000087, gene-QYE76_028678, gene-QYE76_030060 ... gene-QYE76_031598, gene-QYE76_033915, gene-QYE76_036735, gene-QYE76_041797, gene-QYE76_049256, gene-QYE76_050316, gene-QYE76_054552, gene-QYE76_057534, gene-QYE76_063234, gene-QYE76_067297, gene-QYE76_068230
Poaceae	Oryza coarctata	1	Oco02G011730
Poaceae	Paspalum vaginatum	12	gene-BS78_01G159000, gene-BS78_01G509100, gene-BS78_K023600 ... gene-BS78_02G158400, gene-BS78_03G144500, gene-BS78_06G011500, gene-BS78_07G103100, gene-BS78_08G171400, gene-BS78_09G092300, gene-BS78_09G127100, gene-BS78_K094000, gene-BS78_K232400
Poaceae	Sporobolus alterniflorus	58	Chr01G023790, Chr01G030010, Chr01G030020, Chr02G006560 ... Chr03G008690, Chr03G014360, Chr03G020670, Chr04G004920, Chr04G012320, Chr04G016020, Chr05G014850, Chr05G034680, Chr06G003600, Chr06G022090, Chr06G025580, Chr07G002900, Chr07G002910, Chr07G004700, Chr07G011230, Chr07G024870, Chr08G005710, Chr09G009570, Chr09G009580, Chr09G011790, Chr10G005280, Chr10G005290, Chr10G015210, Chr10G016380, Chr10G016940, Chr11G022120, Chr12G011970, Chr12G011980, Chr12G028930, Chr12G033610, Chr14G008010, Chr14G008620, Chr15G006070, Chr15G006080, Chr15G017130, Chr15G018500, Chr17G004410, Chr19G015230, Chr20G005550, Chr20G007320, Chr20G008180, Chr20G010600, Chr20G011050, Chr21G005620, Chr21G006060, Chr23G008510, Chr23G017330, Chr23G017340, Chr23G018540, Chr26G012240, Chr26G013860, Chr26G016800, Chr27G001090, Chr31G001510
Poaceae	Thinopyrum elongatum	6	Tel2E01G536000, Tel5E01G418900, Tel5E01G419000 ... Tel6E01G071300, Tel6E01G071400, Tel7E01G484600
Poaceae	Triticum dicoccoides	1	gene_TRIDC7AG060430
Poaceae	Zoysia japonica	1	nbis-gene-4890
Solanaceae	Lycium barbarum	88	gene-LOC132601412, gene-LOC132601432, gene-LOC132601565 ... gene-LOC132601573, gene-LOC132601684, gene-LOC132602294, gene-LOC132602375, gene-LOC132602429, gene-LOC132603304, gene-LOC132603305, gene-LOC132604055, gene-LOC132604455, gene-LOC132606488, gene-LOC132607687, gene-LOC132607709, gene-LOC132607761, gene-LOC132607768, gene-LOC132607917, gene-LOC132607943, gene-LOC132607992, gene-LOC132607993, gene-LOC132608100, gene-LOC132608378, gene-LOC132609516, gene-LOC132609560, gene-LOC132609609, gene-LOC132610374, gene-LOC132611779, gene-LOC132611785, gene-LOC132611807, gene-LOC132611832, gene-LOC132611837, gene-LOC132612053, gene-LOC132612165, gene-LOC132612201, gene-LOC132612646, gene-LOC132612968, gene-LOC132612997, gene-LOC132613026, gene-LOC132613111, gene-LOC132613125, gene-LOC132613148, gene-LOC132613217, gene-LOC132613435, gene-LOC132613816, gene-LOC132618126, gene-LOC132618148, gene-LOC132620134, gene-LOC132620753, gene-LOC132621465, gene-LOC132624192, gene-LOC132624359, gene-LOC132624397, gene-LOC132624406, gene-LOC132628580, gene-LOC132628589, gene-LOC132628681, gene-LOC132628733, gene-LOC132628864, gene-LOC132629048, gene-LOC132630311, gene-LOC132631151, gene-LOC132631279, gene-LOC132631539, gene-LOC132631704, gene-LOC132633629, gene-LOC132637024, gene-LOC132637083, gene-LOC132637342, gene-LOC132637683, gene-LOC132637737, gene-LOC132638126, gene-LOC132639158, gene-LOC132639500, gene-LOC132639506, gene-LOC132639599, gene-LOC132639606, gene-LOC132639741, gene-LOC132639932, gene-LOC132640665, gene-LOC132640975, gene-LOC132641207, gene-LOC132641299, gene-LOC132642290, gene-LOC132642335, gene-LOC132642451, gene-LOC132644299, gene-LOC132644396
Solanaceae	Solanum pennellii	1	gene-LOC107016424
Tamaricaceae	Reaumuria soongarica	22	MSTRG.2861_chr02_-, STRG.10221_chr06_+, STRG.10559_chr07_- ... STRG.11171_chr05_-, STRG.14935_chr08_-, STRG.17875_chr09_+, STRG.2271_chr01_+, STRG.24870_chr08_+, STRG.26144_chr11_+, STRG.26385_chr11_+, STRG.26543_chr11_-, STRG.26574_chr11_+, STRG.28350_chr04_+, STRG.30337_chr10_-, STRG.31126_chr11_+, STRG.31648_chr11_+, STRG.32148_chr09_+, STRG.3814_chr02_-, STRG.4509_chr03_-, STRG.8526_chr06_+, STRG.8964_chr03_+, STRG.9014_chr03_-