Basic Information
Locus ID:
gene-LOC132624027
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 99093850 | 99097658 | + | gene-LOC132624027 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 50,731.94 Da | 46.46 | 63.72 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 229 | 360 | 2.5E-27 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 121 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049358708.1 | uncharacterized protein LOC125823367 [Solanum verrucosum] | 0 |
| TrEMBL | O49072 | PttA2 protein OS=Petunia hybrida OX=4102 GN=PttA PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 52 | gene-LOC132601505, gene-LOC132601643, gene-LOC132601653 ... |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107009182, gene-LOC107016531, gene-LOC114076118 |