HalophFGD

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Basic Information
Locus ID: gene-LOC132623410
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: FBD
Maps and Mapping Data
Chromosome Start End Strand ID
chr12 101755505 101760571 - gene-LOC132623410
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.78 31,076.13 Da 50.92 111.69 0.15
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08387 FBD 191 225 2.4E-5 IPR006566
SUPERFAMILY SSF52047 RNI-like 14 176 6.98E-6 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 5 217 1.5E-8 IPR032675
Best hit
Source Best Hit ID Description E-value
RefSeq XP_047263469.1 F-box/FBD/LRR-repeat protein At5g56420 [Capsicum annuum] 0
TrEMBL A0A2G2XHL5 F-box domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_05435 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 6 jg22882, jg26218, jg28878, jg28880, jg28881, jg29020
Rhizophoraceae Kandelia candel 1 evm.TU.utg000027l.110
Solanaceae Lycium barbarum 2 gene-LOC132623410, gene-LOC132640003
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.