Basic Information
Locus ID:
gene-LOC132623371
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 100095870 | 100097734 | - | gene-LOC132623371 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 69,239.66 Da | 35.08 | 99.04 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 363 | 607 | 4.6E-32 | IPR001245 |
| Pfam | PF01476 | LysM domain | 196 | 232 | 0.16 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 608 | 6.88E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 616 | 2.8E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 303 | 403 | 5.0E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 292 | 610 | 27.21291 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 187 | 231 | 9.412465 | IPR018392 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_016562232.2 | protein LYK5-like [Capsicum annuum] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8FSV5 | protein LYK5-like OS=Capsicum annuum OX=4072 GN=LOC107861409 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology