Basic Information
Locus ID:
gene-LOC132623275
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 66507245 | 66510537 | - | gene-LOC132623275 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 17,703.03 Da | 49.81 | 87.42 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 10 | 148 | 8.7799E-54 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 10 | 147 | 3.1E-40 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 2 | 153 | 3.02E-47 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 4 | 151 | 4.9E-51 | IPR016135 |
| SMART | SM00212 | ubc_7 | 9 | 153 | 7.1E-46 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 6 | 153 | 46.176197 | IPR000608 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_008221668.1 | PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Prunus mume] | 0 |
| P25866 | Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6MIZ5 | UBC core domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_3X102101 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology