Basic Information
Locus ID:
gene-LOC132623048
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 80785516 | 80791258 | + | gene-LOC132623048 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 68,635.97 Da | 40.67 | 96.02 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 296 | 564 | 8.2E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 7.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 197 | 4.81E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 277 | 568 | 6.88E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 1.6E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 371 | 581 | 1.8E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 370 | 6.7E-35 | - |
| SMART | SM00220 | serkin_6 | 295 | 566 | 2.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 570 | 36.96537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 417 | 429 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 301 | 323 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009619541.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Nicotiana tomentosiformis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3Y6T3 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107772790 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology