Basic Information
Locus ID:
gene-LOC132623046
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
C-terminus of AA_permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 77401438 | 77403892 | + | gene-LOC132623046 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 65,098.20 Da | 23.62 | 106.85 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 519 | 568 | 2.4E-15 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 80 | 469 | 8.8E-45 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 74 | 507 | 8.4E-93 | - |
| PIRSF | PIRSF006060 | AA_transporter | 464 | 589 | 0.069 | - |
| PIRSF | PIRSF006060 | AA_transporter | 64 | 453 | 3.4E-68 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_009778011.1 | PREDICTED: cationic amino acid transporter 1-like [Nicotiana sylvestris] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7WL56 | cationic amino acid transporter 1-like OS=Nicotiana sylvestris OX=4096 GN=LOC104227467 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology