Basic Information
Locus ID:
gene-LOC132622993
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 29890818 | 29899651 | + | gene-LOC132622993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 78,426.56 Da | 50.96 | 92.46 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 5.8E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 103 | 162 | 1.4E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 432 | 679 | 1.9E-22 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 680 | 4.25E-36 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 189 | 3.49E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 690 | 4.7E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 201 | 7.7E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 394 | 499 | 1.8E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 684 | 18.577036 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 341 | - | - |
| Coils | Coil | Coil | 711 | 711 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_049375809.1 | protein MALE DISCOVERER 1-like isoform X1 [Solanum verrucosum] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BC87 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_012962 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology