Basic Information
Locus ID:
gene-LOC132622876
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 62685367 | 62691048 | - | gene-LOC132622876 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 66,464.57 Da | 43.35 | 88.02 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 105 | 368 | 1.2594E-126 | - |
| Pfam | PF00069 | Protein kinase domain | 106 | 369 | 1.3E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 400 | 521 | 5.41E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 398 | 4.05E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 196 | 380 | 3.1E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 387 | 518 | 1.3E-17 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 409 | 478 | 1.3E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 195 | 4.7E-23 | - |
| SMART | SM00220 | serkin_6 | 106 | 369 | 6.5E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 106 | 369 | 51.325512 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 112 | 139 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 231 | 243 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_016558910.2 | CDPK-related protein kinase isoform X1 [Capsicum annuum] | 0 |
| P53681 | CDPK-related protein kinase OS=Daucus carota OX=4039 GN=CRK PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G3D301 | CDPK-related kinase 8 OS=Capsicum chinense OX=80379 GN=BC332_03667 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology