Basic Information
Locus ID:
gene-LOC132622380
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 131437703 | 131440002 | - | gene-LOC132622380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 75,164.21 Da | 44.28 | 86.97 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 243 | 2.26225E-52 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 355 | 620 | 1.53792E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 350 | 614 | 6.1E-39 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 32 | 241 | 2.0E-36 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 243 | 8.4E-42 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 636 | 1.5E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 427 | 2.9E-22 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 21 | 251 | 2.0E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 624 | 1.6E-60 | - |
| SMART | SM00220 | serkin_6 | 349 | 628 | 7.4E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 349 | 628 | 33.474274 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 355 | 377 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 474 | 486 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_049385772.1 | L-type lectin-domain containing receptor kinase S.6 [Solanum stenotomum] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | M0ZJK2 | Lectin protein kinase family protein OS=Solanum tuberosum OX=4113 GN=102581704 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology