Basic Information
Locus ID:
gene-LOC132622251
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 97023777 | 97029178 | + | gene-LOC132622251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 69,728.70 Da | 49.33 | 83.11 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 21 | 124 | 8.08801E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 28 | 118 | 8.9E-8 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 211 | 463 | 7.2E-89 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 22 | 117 | 4.63E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 122 | 1.1E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 487 | 88.64241 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 10.406092 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 586 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 623 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_049358343.1 | BTB/POZ domain-containing protein NPY3 [Solanum verrucosum] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2B9K6 | BTB/POZ domain-containing protein NPY4 OS=Solanum chilense OX=4083 GN=EJD97_014165 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology