Basic Information
Locus ID:
gene-LOC132622205
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
strubbelig-receptor family 8
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 71418460 | 71424603 | - | gene-LOC132622205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 78,783.38 Da | 39.58 | 89.02 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 422 | 694 | 2.88276E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 2.4E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 1.2E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 419 | 691 | 8.7E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 691 | 7.06E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 244 | 3.69E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 720 | 3.8E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 377 | 493 | 6.6E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 255 | 1.7E-42 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 198 | 220 | 7.011191 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 694 | 37.855812 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_006348158.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8 [Solanum tuberosum] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | M1BE10 | Kinase OS=Solanum tuberosum OX=4113 GN=102581192 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology