Basic Information
Locus ID:
gene-LOC132622183
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 85787328 | 85794105 | + | gene-LOC132622183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 85,473.04 Da | 45.13 | 99.76 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 166 | 225 | 3.5E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 510 | 775 | 1.7E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 489 | 775 | 3.46E-65 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 76 | 284 | 8.26E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 81 | 303 | 3.7E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 584 | 778 | 3.5E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 474 | 583 | 4.8E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 236 | 258 | 6.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 188 | 211 | 6.6 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 166 | 188 | 7.065096 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 507 | 779 | 32.696903 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_018624553.1 | protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Nicotiana tomentosiformis] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1S3X979 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107762635 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology