Basic Information
Locus ID:
gene-LOC132622086
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 90183793 | 90193996 | - | gene-LOC132622086 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 66,261.53 Da | 47.05 | 84.56 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 286 | 552 | 7.88716E-137 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 280 | 551 | 3.8E-69 | IPR001245 |
| SUPERFAMILY | SSF55021 | ACT-like | 169 | 227 | 3.04E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 265 | 552 | 7.46E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 269 | 358 | 8.1E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 359 | 575 | 9.6E-59 | - |
| SMART | SM00220 | serkin_6 | 280 | 556 | 2.6E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 555 | 43.93343 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 172 | 247 | 11.755505 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 397 | 409 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 460 | 470 | 1.1E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 479 | 501 | 1.1E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 523 | 545 | 1.1E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 354 | 367 | 1.1E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35780.1 | ACT-like protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_016560441.1 | serine/threonine-protein kinase STY17 [Capsicum annuum] | 0 |
| Q8RWL6 | Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XFM7 | Serine/threonine-protein kinase STY17-like OS=Capsicum baccatum OX=33114 GN=CQW23_04784 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology