Basic Information
Locus ID:
gene-LOC132622062
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
WRKY transcription factor 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 101976573 | 101980686 | + | gene-LOC132622062 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 43,415.09 Da | 63.37 | 54.21 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 320 | 377 | 8.3E-26 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 179 | 234 | 1.5E-21 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 311 | 379 | 4.32E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 176 | 235 | 6.28E-23 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 303 | 380 | 3.9E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 162 | 236 | 4.6E-25 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 319 | 378 | 2.6E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 177 | 235 | 3.4E-31 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 179 | 236 | 20.851053 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 314 | 379 | 35.714287 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 249 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_016561364.1 | probable WRKY transcription factor 3 [Capsicum annuum] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8G067 | probable WRKY transcription factor 3 OS=Capsicum annuum OX=4072 GN=LOC107860501 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology