Basic Information
Locus ID:
gene-LOC132621926
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 74267895 | 74276656 | + | gene-LOC132621926 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 139,663.98 Da | 45.75 | 68.85 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 991 | 1248 | 1.28922E-109 | - |
| CDD | cd06410 | PB1_UP2 | 186 | 281 | 2.77672E-46 | - |
| Pfam | PF00564 | PB1 domain | 199 | 282 | 8.1E-19 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 987 | 1248 | 5.7E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 957 | 1247 | 2.49E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 198 | 289 | 2.81E-22 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 978 | 1072 | 8.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1073 | 1268 | 4.8E-51 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 201 | 284 | 9.0E-11 | - |
| SMART | SM00666 | PB1_new | 197 | 283 | 8.1E-31 | IPR000270 |
| SMART | SM00220 | serkin_6 | 985 | 1254 | 2.6E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 985 | 1251 | 40.343395 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1110 | 1122 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 991 | 1016 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1219 | 1241 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1067 | 1080 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1175 | 1197 | 7.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1104 | 1122 | 7.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 690 | 719 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_016559195.1 | uncharacterized protein LOC107858904 isoform X2 [Capsicum annuum] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8FKE6 | uncharacterized protein LOC107858904 isoform X2 OS=Capsicum annuum OX=4072 GN=LOC107858904 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology