Basic Information
Locus ID:
gene-LOC132621856
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 71672685 | 71680716 | + | gene-LOC132621856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 68,711.45 Da | 33.19 | 90.40 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 331 | 591 | 1.22082E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 593 | 3.7E-46 | IPR001245 |
| Pfam | PF01476 | LysM domain | 47 | 74 | 0.095 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 303 | 594 | 2.7E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 396 | 609 | 5.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 295 | 395 | 2.6E-26 | - |
| SMART | SM00220 | serkin_6 | 325 | 596 | 7.4E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 325 | 597 | 38.223297 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 331 | 353 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 439 | 451 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_006348155.1 | PREDICTED: chitin elicitor receptor kinase 1-like [Solanum tuberosum] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | M1BCX5 | Receptor protein kinase OS=Solanum tuberosum OX=4113 GN=102580181 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology