Basic Information
Locus ID:
gene-LOC132621762
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 77427236 | 77432950 | - | gene-LOC132621762 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 66,207.25 Da | 33.09 | 102.57 | 0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 516 | 566 | 1.5E-16 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 77 | 485 | 8.0E-46 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 71 | 507 | 2.6E-96 | - |
| PIRSF | PIRSF006060 | AA_transporter | 461 | 587 | 470.0 | - |
| PIRSF | PIRSF006060 | AA_transporter | 57 | 515 | 2.0E-72 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 608 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_049371289.1 | cationic amino acid transporter 1-like [Solanum verrucosum] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0IL56 | Putative cationic amino acid transporter 1-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology