Basic Information
Locus ID:
gene-LOC132621611
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 100612534 | 100616200 | + | gene-LOC132621611 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 68,992.65 Da | 42.41 | 96.56 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 307 | 573 | 9.5E-43 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 4.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 4.3E-12 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 197 | 4.25E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 574 | 2.0E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 380 | 2.9E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 592 | 1.1E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 2.0E-55 | IPR032675 |
| SMART | SM00220 | serkin_6 | 304 | 573 | 5.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 583 | 34.930073 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 332 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_015066950.1 | protein NSP-INTERACTING KINASE 1-like [Solanum pennellii] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7F9K3 | Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101245114 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology