Basic Information
Locus ID:
gene-LOC132621543
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 83773215 | 83777269 | - | gene-LOC132621543 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 110,299.15 Da | 35.04 | 102.72 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 1.2E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 70 | 129 | 7.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 689 | 953 | 1.2E-42 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 141 | 155 | 0.31 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 305 | 4.19E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 334 | 591 | 4.42E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 970 | 5.53E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 181 | 1.1E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 285 | 8.2E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 775 | 8.5E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 623 | 1.5E-81 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 989 | 5.0E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 501 | 524 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 525 | 549 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 115 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 41.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 687 | 970 | 6.5E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 992 | 36.173866 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 820 | 832 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 716 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_015066471.1 | receptor-like protein kinase HSL1 [Solanum pennellii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2BX62 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_002886 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology