Basic Information
Locus ID:
gene-LOC132621372
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 95824421 | 95829207 | + | gene-LOC132621372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 108,711.66 Da | 29.37 | 97.76 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 504 | 562 | 1.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 202 | 4.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 2.0E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 683 | 894 | 1.7E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 679 | 972 | 4.45E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 311 | 9.86E-50 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 270 | 589 | 1.57E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 263 | 624 | 4.1E-97 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 262 | 8.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 206 | 2.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 758 | 9.0E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 759 | 981 | 5.3E-58 | - |
| SMART | SM00220 | serkin_6 | 681 | 978 | 1.3E-36 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 528 | 550 | 7.00349 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 978 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 710 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 804 | 816 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_009804629.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Nicotiana sylvestris] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7YZS8 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Nicotiana sylvestris OX=4096 GN=LOC104249828 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology