Basic Information
Locus ID:
gene-LOC132621098
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 104243347 | 104246740 | - | gene-LOC132621098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 92,472.96 Da | 37.63 | 68.22 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 170 | 256 | 8.65385E-25 | - |
| Pfam | PF00855 | PWWP domain | 170 | 256 | 4.7E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 169 | 271 | 6.62E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 159 | 265 | 5.1E-24 | - |
| SMART | SM00293 | PWWP_4 | 170 | 231 | 1.0E-5 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 172 | 233 | 13.201664 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 672 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_049383119.1 | PWWP domain-containing protein 6 [Solanum stenotomum] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | M0ZI84 | PWWP domain-containing protein OS=Solanum tuberosum OX=4113 GN=102594150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology