Basic Information
Locus ID:
gene-LOC132620346
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 54532874 | 54537646 | - | gene-LOC132620346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 73,106.86 Da | 39.54 | 71.90 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 526 | 655 | 1.11071E-41 | IPR033734 |
| CDD | cd09612 | Jacalin | 275 | 404 | 1.1049E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 150 | 7.39534E-48 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 523 | 655 | 2.4E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 275 | 404 | 1.7E-30 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 23 | 152 | 4.9E-34 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 263 | 404 | 7.33E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 513 | 654 | 5.76E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 152 | 1.26E-43 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 1.5E-57 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 254 | 404 | 3.1E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 506 | 655 | 1.1E-49 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 275 | 406 | 8.6E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 152 | 4.9E-45 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 523 | 656 | 2.0E-41 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 264 | 406 | 49.970318 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 512 | 656 | 47.925652 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 152 | 53.956478 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 250 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_019255819.1 | PREDICTED: jacalin-related lectin 3 isoform X2 [Nicotiana attenuata] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J6HVX7 | Jacalin-related lectin 3 OS=Nicotiana attenuata OX=49451 GN=JAL3 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology