Basic Information
Locus ID:
gene-LOC132620138
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 113471640 | 113472462 | + | gene-LOC132620138 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 22,984.04 Da | 53.88 | 98.92 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2 | 166 | 1.7E-26 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 188 | 2.16E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 185 | 1.9E-52 | - |
| SMART | SM00220 | serkin_6 | 1 | 146 | 0.0033 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 183 | 24.725325 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 20 | 32 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65800.1 | receptor kinase 2. encodes a putative receptor-like serine/threonine protein kinases that is similar to brassica self-incompatibility (S) locus. expressed in specifically in cotyledons, leaves, and sepals, in correlation with the maturation of these structures. | 0 |
| RefSeq | XP_009622059.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 [Nicotiana tomentosiformis] | 0 |
| Q9S972 | Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1S3Z7T1 | Receptor-like serine/threonine-protein kinase OS=Nicotiana tabacum OX=4097 GN=LOC107783936 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg50583 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30116040 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10019425m.g.v1.0 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1618 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9148 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_7AG0570250 |
| Poaceae | Oryza coarctata | 1 | Oco09G013380 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG009480 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-23866, nbisL1-mrna-23880 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132620138 |
| Zosteraceae | Zostera marina | 2 | Zosma03g09360.v3.1, Zosma150g00030.v3.1 |