HalophFGD

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Basic Information
Locus ID: gene-LOC132619801
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: Lateral organ boundaries (LOB) domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr11 45821951 45823218 + gene-LOC132619801
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.06 20,731.47 Da 55.20 82.57 -0.25
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03195 Lateral organ boundaries (LOB) domain 11 109 2.3E-28 IPR004883
ProSiteProfiles PS50891 LOB domain profile. 10 112 22.365868 IPR004883
Coils Coil Coil 91 111 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_009801618.1 PREDICTED: LOB domain-containing protein 22-like [Nicotiana sylvestris] 0
TrEMBL A0A1S4A3K4 LOB domain-containing protein 22-like OS=Nicotiana tabacum OX=4097 GN=LOC107793368 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 1 Ag10G01448
Plantaginaceae Plantago ovata 2 Pov_00002940, Pov_00036838
Solanaceae Lycium barbarum 2 gene-LOC132619749, gene-LOC132619801
Solanaceae Solanum chilense 1 SOLCI000035600
Solanaceae Solanum pennellii 5 gene-LOC107025095, gene-LOC107029960, gene-LOC107029962 ...
gene-LOC107030986, gene-LOC114078611
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.