Basic Information
Locus ID:
gene-LOC132619749
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 37964079 | 37993260 | + | gene-LOC132619749 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 48,386.53 Da | 52.10 | 77.08 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 211 | 288 | 7.3E-9 | IPR001245 |
| Pfam | PF03195 | Lateral organ boundaries (LOB) domain | 5 | 102 | 6.9E-29 | IPR004883 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 288 | 1.59E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 179 | 288 | 1.7E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 207 | 424 | 10.11077 | IPR000719 |
| ProSiteProfiles | PS50891 | LOB domain profile. | 4 | 105 | 23.045778 | IPR004883 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 213 | 246 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 180 | - | - |
| Coils | Coil | Coil | 84 | 111 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02800.1 | protein kinase 2B. Encodes protein kinase APK2b. | 0 |
| RefSeq | XP_004238776.1 | probable serine/threonine-protein kinase PBL3 [Solanum lycopersicum] | 0 |
| O49840 | Probable serine/threonine-protein kinase PBL3 OS=Arabidopsis thaliana OX=3702 GN=PBL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0V0ILU0 | Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag10G01448 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00002940, Pov_00036838 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132619749, gene-LOC132619801 |
| Solanaceae | Solanum chilense | 1 | SOLCI000035600 |
| Solanaceae | Solanum pennellii | 5 | gene-LOC107025095, gene-LOC107029960, gene-LOC107029962 ... |