Basic Information
Locus ID:
gene-LOC132619482
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 16122958 | 16123884 | + | gene-LOC132619482 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 35,712.96 Da | 38.16 | 102.53 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 37 | 72 | 3.5E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 35 | 79 | 3.14E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 177 | 280 | 5.1E-8 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 30 | 125 | 4.0E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 126 | 305 | 5.6E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 40 | 81 | 0.0018 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56820.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_010325175.1 | F-box/FBD/LRR-repeat protein At4g26340-like isoform X2 [Solanum lycopersicum] | 0 |
| Q9FJT1 | Putative FBD-associated F-box protein At5g56820 OS=Arabidopsis thaliana OX=3702 GN=At5g56820 PE=4 SV=2 | 0 | |
| TrEMBL | A0A1U8H6Z6 | LOW QUALITY PROTEIN: FBD-associated F-box protein At4g13985-like OS=Capsicum annuum OX=4072 GN=LOC107876776 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 6 | gene-LOC132612692, gene-LOC132617794, gene-LOC132619153 ... |
| Solanaceae | Solanum chilense | 2 | SOLCI002523600, SOLCI002523700 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107025266, gene-LOC107025267, gene-LOC107025498 |