halophFGD

Basic Information

Locus ID: gene-LOC132619472

Species & Taxonomic ID: Lycium barbarum & 112863

Genome Assembly: GCF_019175385.1

Description: Protein FAR1-RELATED SEQUENCE

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr11	15381257	15383931	+	gene-LOC132619472

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.76	71,574.27 Da	37.72	82.87	-0.46

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03108	MuDR family transposase	163	226	1.2E-10	IPR004332
Pfam	PF04434	SWIM zinc finger	491	520	4.1E-6	IPR007527
Pfam	PF10551	MULE transposase domain	324	392	1.2E-10	IPR018289
SMART	SM00575	26again6	496	523	2.7E-5	IPR006564
ProSiteProfiles	PS50966	Zinc finger SWIM-type profile.	489	521	9.655888	IPR007527
MobiDBLite	mobidb-lite	consensus disorder prediction	571	617	-	-

Gene Ontology

Molecular Function:

GO:0008270 (zinc ion binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G05850.1	transposable element gene.
RefSeq	XP_009799356.1	PREDICTED: uncharacterized protein LOC104245444 [Nicotiana sylvestris]
TrEMBL	A0A1U7XZB6	uncharacterized protein LOC104241748 OS=Nicotiana sylvestris OX=4096 GN=LOC104241748 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Brassica nigra	1	BniB06g033880.2N
Solanaceae	Lycium barbarum	230	gene-LOC132599393, gene-LOC132600219, gene-LOC132600295 ... gene-LOC132601216, gene-LOC132601258, gene-LOC132601303, gene-LOC132601304, gene-LOC132601381, gene-LOC132601411, gene-LOC132601425, gene-LOC132601426, gene-LOC132601507, gene-LOC132601560, gene-LOC132601664, gene-LOC132601718, gene-LOC132601753, gene-LOC132601757, gene-LOC132601771, gene-LOC132601824, gene-LOC132601886, gene-LOC132601907, gene-LOC132601908, gene-LOC132602127, gene-LOC132602128, gene-LOC132602745, gene-LOC132604161, gene-LOC132605145, gene-LOC132605985, gene-LOC132606121, gene-LOC132607719, gene-LOC132607902, gene-LOC132607964, gene-LOC132608015, gene-LOC132608016, gene-LOC132608021, gene-LOC132608065, gene-LOC132608090, gene-LOC132608116, gene-LOC132608143, gene-LOC132608147, gene-LOC132608180, gene-LOC132608332, gene-LOC132608345, gene-LOC132608731, gene-LOC132609044, gene-LOC132609197, gene-LOC132609703, gene-LOC132610409, gene-LOC132610450, gene-LOC132610460, gene-LOC132611237, gene-LOC132611489, gene-LOC132611573, gene-LOC132611733, gene-LOC132611735, gene-LOC132611784, gene-LOC132611800, gene-LOC132611826, gene-LOC132612005, gene-LOC132612028, gene-LOC132612051, gene-LOC132612091, gene-LOC132612095, gene-LOC132612117, gene-LOC132612248, gene-LOC132612267, gene-LOC132612698, gene-LOC132612807, gene-LOC132612942, gene-LOC132613016, gene-LOC132613131, gene-LOC132613234, gene-LOC132613250, gene-LOC132613426, gene-LOC132613529, gene-LOC132613829, gene-LOC132616616, gene-LOC132617062, gene-LOC132617425, gene-LOC132617559, gene-LOC132617758, gene-LOC132617855, gene-LOC132618075, gene-LOC132618856, gene-LOC132619056, gene-LOC132619392, gene-LOC132619393, gene-LOC132619472, gene-LOC132619487, gene-LOC132619557, gene-LOC132619563, gene-LOC132619566, gene-LOC132619660, gene-LOC132619661, gene-LOC132619761, gene-LOC132619770, gene-LOC132619956, gene-LOC132620103, gene-LOC132620107, gene-LOC132620141, gene-LOC132620161, gene-LOC132620194, gene-LOC132620226, gene-LOC132621312, gene-LOC132621838, gene-LOC132621915, gene-LOC132622178, gene-LOC132622188, gene-LOC132622537, gene-LOC132623570, gene-LOC132623571, gene-LOC132623954, gene-LOC132624071, gene-LOC132624134, gene-LOC132624173, gene-LOC132624307, gene-LOC132624349, gene-LOC132624420, gene-LOC132624423, gene-LOC132624502, gene-LOC132624589, gene-LOC132624732, gene-LOC132624778, gene-LOC132627767, gene-LOC132628342, gene-LOC132628373, gene-LOC132628390, gene-LOC132628410, gene-LOC132628445, gene-LOC132628446, gene-LOC132628473, gene-LOC132628517, gene-LOC132628528, gene-LOC132628581, gene-LOC132628585, gene-LOC132628646, gene-LOC132628691, gene-LOC132628748, gene-LOC132628752, gene-LOC132628756, gene-LOC132628787, gene-LOC132628829, gene-LOC132628882, gene-LOC132628924, gene-LOC132628935, gene-LOC132628990, gene-LOC132629014, gene-LOC132629055, gene-LOC132629080, gene-LOC132629089, gene-LOC132630234, gene-LOC132630235, gene-LOC132630254, gene-LOC132630483, gene-LOC132630737, gene-LOC132630850, gene-LOC132630904, gene-LOC132631112, gene-LOC132631139, gene-LOC132631236, gene-LOC132631250, gene-LOC132631266, gene-LOC132631395, gene-LOC132631545, gene-LOC132631547, gene-LOC132634029, gene-LOC132634394, gene-LOC132637089, gene-LOC132637131, gene-LOC132637152, gene-LOC132637153, gene-LOC132637157, gene-LOC132637186, gene-LOC132637193, gene-LOC132637227, gene-LOC132637236, gene-LOC132637266, gene-LOC132637280, gene-LOC132637305, gene-LOC132637308, gene-LOC132637317, gene-LOC132637385, gene-LOC132637407, gene-LOC132637426, gene-LOC132637431, gene-LOC132637479, gene-LOC132637586, gene-LOC132637605, gene-LOC132637617, gene-LOC132637618, gene-LOC132637650, gene-LOC132637711, gene-LOC132637946, gene-LOC132637947, gene-LOC132637958, gene-LOC132638244, gene-LOC132638373, gene-LOC132639171, gene-LOC132639216, gene-LOC132639224, gene-LOC132639254, gene-LOC132639255, gene-LOC132639329, gene-LOC132639491, gene-LOC132639646, gene-LOC132639669, gene-LOC132639736, gene-LOC132639752, gene-LOC132639753, gene-LOC132639889, gene-LOC132643737, gene-LOC132643772, gene-LOC132643811, gene-LOC132643824, gene-LOC132643896, gene-LOC132643918, gene-LOC132643958, gene-LOC132644140, gene-LOC132644141, gene-LOC132644178, gene-LOC132644179, gene-LOC132644289, gene-LOC132644379, gene-LOC132644457, gene-LOC132644707, gene-LOC132644715, gene-LOC132644743, gene-LOC132644744, gene-LOC132644745, gene-LOC132644746