Basic Information
Locus ID:
gene-LOC132619342
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
CERK1
Description:
Chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 23209847 | 23225404 | + | gene-LOC132619342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 67,413.11 Da | 32.66 | 92.86 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 319 | 586 | 1.2E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 297 | 587 | 2.02E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 294 | 387 | 1.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 388 | 604 | 1.9E-55 | - |
| SMART | SM00220 | serkin_6 | 317 | 589 | 3.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 317 | 590 | 39.028934 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 101 | 150 | 8.662609 | IPR018392 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 323 | 345 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 432 | 444 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 287 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_049412921.1 | chitin elicitor receptor kinase 1-like [Solanum stenotomum] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | E2FYC4 | LysM receptor-like kinase OS=Solanum lycopersicum OX=4081 GN=Bti9 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology