Basic Information
Locus ID:
gene-LOC132619015
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 29633773 | 29635958 | + | gene-LOC132619015 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 44,137.40 Da | 37.32 | 106.42 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 131 | 190 | 2.9E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 72 | 1.2E-6 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 268 | 383 | 3.22E-7 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 287 | 1.7E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 198 | 1.5E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 385 | 9.5E-25 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 155 | 177 | 7.665751 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 156 | 169 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 243 | 256 | 3.9E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17640.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_016580374.1 | LRR receptor-like serine/threonine-protein kinase GSO2 [Capsicum annuum] | 0 |
| TrEMBL | A0A2G2WBS5 | LRRNT_2 domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_16730 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology