Basic Information
Locus ID:
gene-LOC132618954
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 120206082 | 120210429 | + | gene-LOC132618954 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 110,257.24 Da | 33.53 | 105.64 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 688 | 910 | 4.1E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 140 | 199 | 6.8E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 64 | 3.3E-9 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 39 | 284 | 6.28E-42 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 207 | 575 | 2.51E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 967 | 6.01E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 774 | 8.2E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 283 | 4.6E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 180 | 2.4E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 620 | 9.2E-83 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 988 | 6.7E-58 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 970 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 715 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 819 | 831 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_049393704.1 | receptor-like protein kinase HSL1 [Solanum stenotomum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | M1AZ12 | Leucine-rich repeat receptor kinase OS=Solanum tuberosum OX=4113 GN=102594843 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology