Basic Information
Locus ID:
gene-LOC132618800
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 2084909 | 2087498 | - | gene-LOC132618800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 43,150.60 Da | 43.52 | 86.06 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 36 | 106 | 5.8E-6 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 199 | 327 | 1.9E-13 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 31 | 173 | 2.88E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 193 | 328 | 1.7E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 24 | 174 | 2.5E-9 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 189 | 328 | 1.1E-8 | IPR036378 |
| SMART | SM00554 | fasc_3 | 61 | 176 | 0.82 | IPR000782 |
| SMART | SM00554 | fasc_3 | 224 | 328 | 4.1E-14 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 186 | 325 | 12.057882 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 25 | 173 | 10.359324 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 383 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55730.1 | FASCICLIN-like arabinogalactan 1. fasciclin-like arabinogalactan-protein 1 (Fla1) | 0 |
| RefSeq | XP_019262927.1 | PREDICTED: fasciclin-like arabinogalactan protein 1 [Nicotiana attenuata] | 0 |
| Q9FM65 | Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A314L9A7 | Fasciclin-like arabinogalactan protein 1 OS=Nicotiana attenuata OX=49451 GN=FLA1_0 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology