Basic Information
Locus ID:
gene-LOC132618634
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 23813834 | 23836102 | + | gene-LOC132618634 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 41,578.06 Da | 36.02 | 95.92 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 141 | 219 | 2.1E-6 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 70 | 336 | 6.1E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 8 | 343 | 3.5E-65 | IPR015943 |
| SMART | SM00320 | WD40_4 | 297 | 337 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 255 | 294 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 165 | 203 | 0.13 | IPR001680 |
| SMART | SM00320 | WD40_4 | 124 | 162 | 0.41 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 305 | 335 | 8.870959 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_006363024.1 | PREDICTED: SEC12-like protein 2 [Solanum tuberosum] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | M1A6I5 | Prolactin regulatory element-binding protein OS=Solanum tuberosum OX=4113 GN=102596955 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology