Basic Information
Locus ID:
gene-LOC132618326
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 9533622 | 9540310 | - | gene-LOC132618326 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 49,494.27 Da | 41.36 | 108.06 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 295 | 434 | 7.7E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 104 | 260 | 1.0E-22 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 280 | 438 | 1.6E-18 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 134 | 274 | 4.4E-15 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 89 | 437 | 1.8E-102 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 70 | 437 | 8.6E-121 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_049374218.1 | vacuolar cation/proton exchanger 3-like isoform X1 [Solanum verrucosum] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0V0IKX3 | Vacuolar cation/proton exchanger OS=Solanum chacoense OX=4108 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology