Basic Information
Locus ID:
gene-LOC132618301
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 41168518 | 41173593 | + | gene-LOC132618301 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 41,149.94 Da | 46.97 | 80.68 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 307 | 355 | 4.8E-10 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 257 | 4.01E-25 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 275 | 357 | 4.59E-16 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 43 | 262 | 9.6E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 293 | 366 | 3.3E-15 | - |
| SMART | SM00326 | SH3_2 | 303 | 358 | 2.5E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 300 | 359 | 18.81768 | IPR001452 |
| Coils | Coil | Coil | 148 | 168 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_049360359.1 | SH3 domain-containing protein 2-like [Solanum verrucosum] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7H7R5 | SH3 domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101264340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology