Basic Information
Locus ID:
gene-LOC132618050
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 113552575 | 113559142 | - | gene-LOC132618050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 32,136.25 Da | 37.00 | 77.58 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 165 | 283 | 1.9E-20 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 78 | 284 | 9.3E-81 | - |
| SMART | SM00702 | p4hc | 85 | 283 | 5.7E-66 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 161 | 284 | 12.410364 | IPR005123 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66060.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_009801759.1 | PREDICTED: probable prolyl 4-hydroxylase 10 [Nicotiana sylvestris] | 0 |
| F4JZ24 | Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1S3XXH0 | probable prolyl 4-hydroxylase 10 OS=Nicotiana tabacum OX=4097 GN=LOC107769895 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology