Basic Information
Locus ID:
gene-LOC132617793
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 121005105 | 121016882 | + | gene-LOC132617793 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 79,559.24 Da | 52.79 | 94.23 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 98 | 157 | 2.2E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 683 | 9.1E-24 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 70 | 4.0E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 683 | 2.38E-40 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 183 | 3.98E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 501 | 3.4E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 202 | 1.9E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 502 | 694 | 3.1E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 687 | 18.87385 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 351 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_049361232.1 | protein MALE DISCOVERER 2-like [Solanum verrucosum] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7FFA5 | Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101251153 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology