Basic Information
Locus ID:
gene-LOC132617650
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 5124413 | 5131357 | + | gene-LOC132617650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 37,968.24 Da | 53.51 | 70.09 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 18 | 93 | 3.1E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 135 | 3.42E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 14 | 188 | 6.8E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 203 | 16.372131 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03230.3 | - | 0 |
| RefSeq | XP_006360117.2 | PREDICTED: uncharacterized protein LOC102581809 [Solanum tuberosum] | 0 |
| P0DH86 | G-type lectin S-receptor-like serine/threonine-protein kinase SRK OS=Arabidopsis thaliana OX=3702 GN=SRK PE=2 SV=1 | 0 | |
| TrEMBL | A0A3Q7HHD3 | G-type lectin S-receptor-like serine/threonine-protein kinase OS=Solanum lycopersicum OX=4081 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 13 | gene-LOC132601702, gene-LOC132608193, gene-LOC132609001 ... |