Basic Information
Locus ID:
gene-LOC132617143
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 13508487 | 13513085 | - | gene-LOC132617143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 107,958.81 Da | 30.10 | 99.04 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 90 | 147 | 1.1E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 233 | 293 | 6.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 682 | 950 | 4.3E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 449 | 508 | 6.2E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 61 | 8.2E-10 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 262 | 586 | 9.42E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 952 | 1.19E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 69 | 374 | 1.41E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 307 | 613 | 8.0E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 199 | 1.4E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 759 | 961 | 1.6E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 306 | 2.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 662 | 758 | 1.6E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 183 | 208 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 280 | 304 | 8.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 519 | 543 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 232 | 256 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 4.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 518 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 679 | 956 | 1.5E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 564 | 589 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 679 | 956 | 38.293964 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 685 | 708 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 803 | 815 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_009773820.1 | PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Nicotiana sylvestris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3YLI8 | receptor-like protein kinase HSL1 isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107777593 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology