Basic Information
Locus ID:
gene-LOC132617083
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 198411 | 212747 | + | gene-LOC132617083 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 123,132.92 Da | 47.19 | 75.05 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 837 | 1094 | 1.3541E-113 | - |
| CDD | cd06410 | PB1_UP2 | 178 | 274 | 3.26283E-42 | - |
| Pfam | PF00564 | PB1 domain | 191 | 274 | 7.4E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 832 | 1094 | 4.3E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 190 | 279 | 1.67E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 821 | 1094 | 1.66E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 919 | 1111 | 9.5E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 193 | 277 | 2.0E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 824 | 918 | 8.7E-26 | - |
| SMART | SM00666 | PB1_new | 189 | 276 | 1.7E-25 | IPR000270 |
| SMART | SM00220 | serkin_6 | 831 | 1101 | 8.6E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 831 | 1097 | 41.841599 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 956 | 968 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 837 | 862 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 913 | 926 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1021 | 1043 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 950 | 968 | 7.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1065 | 1087 | 7.0E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_006346025.1 | PREDICTED: uncharacterized protein LOC102604714 [Solanum tuberosum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | M1C001 | Serine/threonine protein kinase OS=Solanum tuberosum OX=4113 GN=102604714 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology