Basic Information
Locus ID:
gene-LOC132616834
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 122245379 | 122258560 | - | gene-LOC132616834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 113,226.91 Da | 33.40 | 93.90 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 124 | 145 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 243 | 301 | 9.5E-8 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 469 | 649 | 7.7E-33 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 719 | 917 | 3.6E-35 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 409 | 5.1E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 699 | 977 | 2.56E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 793 | 989 | 5.2E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 77 | 215 | 1.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 683 | 790 | 1.8E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 216 | 328 | 4.3E-26 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 468 | 654 | 3.5E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 329 | 443 | 1.2E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 265 | 288 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 361 | 385 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 264 | 23.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 716 | 982 | 5.8E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 716 | 977 | 32.145676 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53420.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_047266493.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53420 isoform X2 [Capsicum annuum] | 0 |
| C0LGG7 | Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1U8GR42 | probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Capsicum annuum OX=4072 GN=LOC107868403 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Salicaceae | Populus euphratica | 1 | populus_peu09879 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132616834, gene-LOC132618246 |
| Solanaceae | Solanum chilense | 1 | SOLCI006585800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014596 |