Basic Information
Locus ID:
gene-LOC132616159
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 14284301 | 14288664 | + | gene-LOC132616159 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 103,194.01 Da | 35.25 | 88.38 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 598 | 871 | 5.92002E-95 | - |
| Pfam | PF13855 | Leucine rich repeat | 112 | 151 | 2.5E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 8.2E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 593 | 866 | 4.6E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 387 | 427 | 1.9E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 330 | 364 | 4.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 441 | 8.84E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 580 | 882 | 1.06E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 670 | 885 | 1.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 552 | 669 | 3.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 326 | 8.9E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 452 | 5.3E-34 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 414 | 439 | 230.0 | - |
| SMART | SM00220 | serkin_6 | 592 | 872 | 3.7E-44 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 259 | 285 | 85.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 92 | 117 | 12.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 390 | 413 | 650.0 | - |
| SMART | SM00369 | LRR_typ_2 | 92 | 114 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 115 | 138 | 1.8E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 414 | 436 | 24.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 117 | 138 | 7.396226 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 592 | 872 | 40.4706 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 717 | 729 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 598 | 620 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_019229118.1 | PREDICTED: receptor protein kinase TMK1-like [Nicotiana attenuata] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2VFG7 | Putative receptor protein kinase TMK1 OS=Capsicum baccatum OX=33114 GN=CQW23_28034 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology