Basic Information
Locus ID:
gene-LOC132615655
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 1507924 | 1514345 | - | gene-LOC132615655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 42,863.23 Da | 52.11 | 83.45 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 84 | 331 | 1.15201E-126 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 79 | 331 | 3.0E-69 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 331 | 9.85E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 160 | 344 | 2.5E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 66 | 159 | 1.3E-22 | - |
| SMART | SM00220 | serkin_6 | 77 | 338 | 1.4E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 334 | 43.240864 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 199 | 211 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 302 | 324 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 155 | 168 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 258 | 280 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 239 | 249 | 7.4E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 193 | 211 | 7.4E-19 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G62400.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_019259835.1 | PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana attenuata] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G3B006 | Serine/threonine-protein kinase HT1 OS=Capsicum chinense OX=80379 GN=BC332_29605 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology