Basic Information
Locus ID:
gene-LOC132614954
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 102174908 | 102179352 | - | gene-LOC132614954 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 68,439.79 Da | 33.93 | 92.48 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 66 | 3.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 153 | 1.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 299 | 565 | 2.7E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 190 | 4.91E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 275 | 568 | 8.41E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 267 | 374 | 9.8E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 375 | 587 | 1.2E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 207 | 2.4E-46 | IPR032675 |
| SMART | SM00220 | serkin_6 | 298 | 567 | 5.5E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 577 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 417 | 429 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.2 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_049389743.1 | protein NSP-INTERACTING KINASE 2-like [Solanum stenotomum] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4ARQ5 | protein NSP-INTERACTING KINASE 2-like isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107800589 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology