Basic Information
Locus ID:
gene-LOC132614704
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Possibly involved in carbohydrate binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 109965094 | 109971862 | - | gene-LOC132614704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 54,803.59 Da | 39.03 | 88.66 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 368 | 438 | 5.3E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 351 | 1.6E-81 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 351 | 1.24E-85 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 356 | 1.4E-114 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 361 | 453 | 2.4E-10 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 2.3E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 265 | 278 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_016439214.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Nicotiana tabacum] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1S3XH95 | glucan endo-1,3-beta-glucosidase 3-like OS=Nicotiana tabacum OX=4097 GN=LOC107765119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology