Basic Information
Locus ID:
gene-LOC132614665
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 24428262 | 24439507 | + | gene-LOC132614665 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 41,675.50 Da | 51.46 | 57.30 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 154 | 285 | 4.9E-10 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049345727.1 | uncharacterized protein LOC125810258 [Solanum verrucosum] | 0 |
| TrEMBL | A0A1S4A0K5 | uncharacterized protein LOC107792510 OS=Nicotiana tabacum OX=4097 GN=LOC107792510 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 1 | Sgl36013 |
| Solanaceae | Lycium barbarum | 35 | gene-LOC132601393, gene-LOC132607984, gene-LOC132608722 ... |
| Solanaceae | Solanum chilense | 11 | SOLCI000202400, SOLCI000775100, SOLCI001269100 ... |
| Solanaceae | Solanum pennellii | 18 | gene-LOC107001376, gene-LOC107003998, gene-LOC107006315 ... |