Basic Information
Locus ID:
gene-LOC132614526
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 107628205 | 107638626 | - | gene-LOC132614526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 183,759.81 Da | 51.92 | 74.72 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1363 | 1626 | 2.98755E-149 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 315 | 587 | 8.19988E-123 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1402 | 1568 | 1.6E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 336 | 576 | 1.3E-31 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 381 | 553 | 1.54E-40 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1358 | 1626 | 9.15E-81 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 38 | 97 | 6.72E-9 | IPR011011 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 380 | 553 | 8.2E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1486 | 1627 | 3.6E-41 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 35 | 103 | 3.4E-5 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1331 | 1483 | 3.1E-38 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1338 | 1627 | 4.7E-120 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1306 | 1626 | 59.356506 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 37 | 96 | 8.710241 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1049 | 1070 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1049 | 1079 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1118 | 1139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1118 | 1144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 685 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_016572723.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Capsicum annuum] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G2WRV6 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Capsicum baccatum OX=33114 GN=CQW23_12175 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology